SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0VPS36_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameVPS36
DescriptionVacuolar protein sorting protein 36 (ell-associated protein of 45 kda).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GON/A
Domain Architecture (Details)
InterPro domains unassigned to SynO:
Vps36 is involved in Golgi to endosome trafficking.
  IPR007261:Vacuolar protein sorting 36
IPR007261:Vps36 
Evalue:-185.148742675781 
Location:126-384
SequencesProtein: VPS36_HUMAN (386 aa)
mRNA: NM_016075
Local Annotation
Synapse Ontology
endosome of the presynaptic compartment. A cellular structure that is involved in the transport of proteins in the neuron after the proteins are endocytosed from the outside to the inside of the cell.
sdb:0088 endosome  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 1107 residues, 51884739-51888059Exon2: 27 residues, 51888152-51888229Exon3: 30 residues, 51889192-51889277Exon4: 23 residues, 51890127-51890192Exon5: 24 residues, 51895709-51895775Exon6: 47 residues, 51898067-51898202Exon7: 28 residues, 51899124-51899202Exon8: 13 residues, 51899322-51899355Exon9: 31 residues, 51905797-51905884Exon10: 32 residues, 51906928-51907018Exon11: 40 residues, 51908425-51908540Exon12: 25 residues, 51911233-51911304Exon13: 25 residues, 51914512-51914581Exon14: 45 residues, 51922634-51922764Exon15: 2 residues, -Jump to VPS36_HUMAN  
Tune and view alternative isoforms