SynDB Home Page
SynDB Home Page

blue bulletSynDB protein details  

Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0SPG20_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
DescriptionSpartin (trans-activated by hepatitis c virus core protein 1).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
Domain Architecture (Details)
InterPro domains unassigned to SynO:
The MIT domain is found in vacuolar sorting proteins.pastin (probable ATPase involved in the assembly or function of nuclear protein complexes).nd a sorting nexin.hich may play a role in intracellular trafficking.
SequencesProtein: SPG20_HUMAN (666 aa)
mRNA: NM_015087
Local Annotation
Synapse Ontology
microtubules of the presynaptic compartment function as the tracks for the intense traffic of organelles from cell body to axon terminals and vice versa. It is generally excluded from the presynaptic vesicle cluster.Microtubules do not directly regulate synapse morphology or function
sdb:0087 microtubules  (Evidence:keywords)
endosome of the presynaptic compartment. A cellular structure that is involved in the transport of proteins in the neuron after the proteins are endocytosed from the outside to the inside of the cell.
sdb:0088 endosome  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 998 residues, 35773776-35776769Exon2: 32 residues, 35784281-35784372Exon3: 55 residues, 35784455-35784614Exon4: 67 residues, 35786363-35786558Exon5: 43 residues, 35798711-35798835Exon6: 54 residues, 35801498-35801654Exon7: 68 residues, 35803535-35803733Exon8: 272 residues, 35807157-35807969Exon9: 32 residues, 35818361-35818453Exon10: 2 residues, -Jump to SPG20_HUMAN  
Tune and view alternative isoforms