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0SNX6_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameSNX6
DescriptionSorting nexin-6 (traf4-associated factor 2).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005622 intracellular (NAS)
0005478 intracellular transporter activity (NAS)
0005515 protein binding (IPI)
0006886 intracellular protein transport (NAS)
0007175 negative regulation of epidermal growth fac... (NAS)

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schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain Architecture (Details)
InterPro domains unassigned to SynO:
The PX (phox) domain occurs in a variety of eukaryotic proteins and have been implicated in highly diverse functions such as cell signalling.esicular trafficking.rotein sorting and lipid modification . PX domains are important phosphoinositide-binding modules that have varying lipid-binding specificities .The PX domain is approximately 120 residues long .nd folds into a three-stranded beta-sheet followed by three -helices and a proline-rich region that immediately preceeds a membrane-interaction loop and spans approximately eight hydrophobic and polar residues. The PX domain of p47phox binds to the SH3 domain in the same protein. Phosphorylation of p47(phox). cytoplasmic activator of the microbicidal phagocyte oxidase (phox).licits interaction of p47(phox) with phoinositides. The protein phosphorylation-driven conformational change of p47(phox) enables its PX domain to bind to phosphoinositides.he interaction of which plays a crucial role in recruitment of p47(phox) from the cytoplasm to membranes and subsequent activation of the phagocyte oxidase. The lipid-binding activity of this protein is normally suppressed by intramolecular interaction of the PX domain with the C-terminal Src homology 3 (SH3) domain .The PX domain is conserved from yeast to human. A recent multiple alignment of representative PX domain sequences can be found in .lthough showing relatively little sequence conservation.heir structure appears to be highly conserved. Although phosphatidylinositol-3-phosphate (PtdIns(3)P) is the primary target of PX domains.inding to phosphatidic acid.hosphatidylinositol-3.-bisphosphate (PtdIns(3.)P2).hosphatidylinositol-3.-bisphosphate (PtdIns(3.)P2).hosphatidylinositol-4.-bisphosphate (PtdIns(4.)P2).nd phosphatidylinositol-3..-trisphosphate (PtdIns(3..)P3) has been reported as well. The PX-domain is also a protein-protein interaction domain .
  IPR001683:Phox-like
IPR001683:PX 
Evalue:-20.050609588623 
Location:29-170
SequencesProtein: SNX6_HUMAN (406 aa)
mRNA: CR625969 NM_152233
Local Annotation
Synapse Ontology
endosome of the presynaptic compartment. A cellular structure that is involved in the transport of proteins in the neuron after the proteins are endocytosed from the outside to the inside of the cell.
sdb:0088 endosome  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 144 residues, 34100366-34100795Exon2: 426 residues, 34100858-34102132Exon3: 30 residues, 34106642-34106728Exon4: 55 residues, 34106810-34106970Exon5: 31 residues, 34114712-34114799Exon6: 15 residues, 34120517-34120557Exon7: 27 residues, 34125186-34125262Exon8: 37 residues, 34132001-34132107Exon9: 32 residues, 34136506-34136597Exon10: 45 residues, 34142299-34142428Exon11: 42 residues, 34144552-34144674Exon12: 39 residues, 34146986-34147097Exon13: 37 residues, 34148594-34148699Exon14: 18 residues, 34168863-34168911Exon15: 9 residues, 34169067-34169088Exon16: 2 residues, -Jump to SNX6_HUMANExon1: 239 residues, 34101417-34102132Exon2: 30 residues, 34106642-34106728Exon3: 55 residues, 34106810-34106970Exon4: 31 residues, 34114712-34114799Exon5: 15 residues, 34120517-34120557Exon6: 27 residues, 34125186-34125262Exon7: 37 residues, 34132001-34132107Exon8: 34 residues, 34136506-34136602Exon9: 43 residues, 34142304-34142428Exon10: 42 residues, 34144552-34144674Exon11: 39 residues, 34146986-34147097Exon12: 37 residues, 34148594-34148699Exon13: 18 residues, 34168863-34168911Exon14: 11 residues, 34169067-34169095Exon15: 2 residues, -Jump to SNX6_HUMAN  
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