SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0SNG2_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameSYNGR2
DescriptionSynaptogyrin-2 (cellugyrin).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005887 integral to plasma membrane (TAS)
Domain Architecture (Details)
InterPro domains unassigned to SynO:
MARVEL domain is often found in lipid-associating proteins - such as Occludin and MAL family proteins . It may be part of the machinery of membrane apposition events.uch as transport vesicle biogenesis.
  IPR008253:Marvel
IPR008253:MARVEL 
Evalue:-47.4685211181641 
Location:20-171
SequencesProtein: SNG2_HUMAN (224 aa)
mRNA: BC105992 NM_004710
Local Annotation
Synapse Ontology
Secretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of nonpeptide neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
sdb:0074 synaptic vesicle  (Evidence:keywords)
Various stages of the synaptic vesicle cycle, including attachment, prefusion, triggering, recycling and reloading of the vesicles with transmitter.
sdb:0098 synaptic vesicle cycling  (Evidence:keywords)
?
sdb:0328 transmitters release and endocytosis  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 43 residues, 73676265-73676391Exon2: 81 residues, 73678492-73678730Exon3: 48 residues, 73679185-73679325Exon4: 398 residues, 73679414-73680604Exon5: 2 residues, -Jump to SNG2_HUMANExon1: 36 residues, 73676286-73676391Exon2: 81 residues, 73678492-73678730Exon3: 405 residues, 73679185-73680395Exon4: 2 residues, -Jump to SNG2_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 3043 73721871-73733310 ~-11K 16728(BIRC5)(+)Loci: 4320 73931373-73980451 ~-49K 16737(-)Loci: 3042 73676265-73680604 ~-4K 16723(SYNGR2)(+)Link out to UCSC