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1Q96K80_HUMAN*   Trembl (?) | Description Local Annotation Link Reference
General Information
DescriptionHypothetical protein flj14451 (zinc finger ccch-type containing 10).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0003676 nucleic acid binding (IEA)
Domain Architecture (Details)
InterPro domains unassigned to SynO:
Zinc finger domains are thought to be involved in DNA-binding.nd exist as different types.epending on thepositions of the cysteine residues. Proteins containing zinc finger domains of the C-x8-C-x5-C-x3-H type include zincfinger proteins from eukaryotes involved in cell cycle or growth phase-related regulation..g. human TIS11B(butyrate response factor 1). probable regulatory protein involved in regulating the response to growth factors.nd the mouse TTP growth factor-inducible nuclear protein.hich has the same function. The mouse TTP proteinis induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35 kDsubunit.hich plays a critical role in both constitutive and enhancer-dependent splicing by mediating essentialprotein-protein interactions and protein-RNA interactions required for 3 splice site selection. It has beenshown that different CCCH zinc finger proteins interact with the 3untranslated region of various mRNA . This type of zinc finger is very often present in twocopies.
  IPR000571:Zinc finger, CCCH-type
SequencesProtein: Q96K80_HUMAN (434 aa)
mRNA: NM_032786
Local Annotation
Synapse Ontology
Calcium release from RyR (Ryanodine Receptor) in the SR (Sarcoplasmic Reticulum) is activated by the calcium induced-calcium-release
sdb:0325 RyR-CICR  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 25 residues, 54798296-54798369Exon2: 23 residues, 54799138-54799202Exon3: 663 residues, 54800561-54802545Exon4: 2 residues, -Jump to Q96K80_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 2763 54396087-54399754 ~-4K 9024(BLOC1S1)(+)Loci: 2764 54423333-54430331 ~-7K 9030(GDF11)(+)Loci: 2765 54654128-54674745 ~-21K 9056(RAB5B)(+)Loci: 2766 54677309-54685574 ~-8K 9057(SUOX)(+)Loci: 2767 54798296-54802545 ~-4K 9067(+)Loci: 4051 54843395-54869544 ~-26K 9082(SMARCC2)(-)Loci: 4052 54951749-54980442 ~-29K 9095(CS)(-)Loci: 4053 55151003-55168448 ~-17K 9108(GLS2)(-)Loci: 4054 55275981-55316430 ~-40K 9114(BAZ2A)(-)Loci: 4055 55318225-55326119 ~-8K 9115(ATP5B)(-)Loci: 4056 55708568-55730160 ~-22K 9128(MYO1A)(-)Loci: 4050 54364622-54387894 ~-23K 9022(ITGA7)(-)Link out to UCSC