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1Q59EZ6_HUMAN*   Trembl (?) | Description Local Annotation Link Reference
General Information
NameN/A
DescriptionVamp-associated protein b/c variant (fragment).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005198 structural molecule activity (IEA)
Domain Architecture (Details)
InterPro domains unassigned to SynO:
Major sperm proteins (MSP) are central components in molecular interactions underlying sperm motility in Caenorhabditis elegans.hose sperm employ an amoebae-like crawling motion using a MSP-containing lamellipod.ather than the flagellar-based swimming motion associated with other sperm. These proteins oligomerise to form an extensive filament system that extends from sperm villipoda.long the leading edge of the pseudopod. About 30 MSP isoforms may exist in C. elegans.MSPs form a fibrous network.hereby MSP dimers form helical subfilaments that coil around one another to produce filaments.hich in turn form supercoils to produce bundles. The crystal structure of MSP from C. elegans reveals an immunoglobulin (Ig)-like seven-stranded beta sandwich fold .
  IPR000535:Major sperm protein
The PapD-like superfamily of periplasmic chaperones directs the assembly of over 30 diverse adhesive surface organelles that mediate the attachment of many different pathogenic bacteria to host tissues. critical early step in the development of disease. PapD.he prototypical chaperone.s necessary for the assembly of P pili. P pili contain the adhesin PapG.hich mediates the attachment of uropathogenic Escherichia coli to Gal(alpha) Gal receptors present on kidney cells and are critical for the initiation of pyelonephritis. The PapD-like chaperones consist of two Ig-like domains oriented toward each other.orming L-shaped molecules. In the chaperone-subunit complex.he G1beta strand of the chaperone completes an atypical Ig fold in the subunit by occupying the groove and running parallel to the subunit C-terminal F strand. This donor strand complementation interaction simultaneously stabilizes pilus subunits and caps their interactive surfaces.reventing their premature oligomerisation in the periplasm. During pilus biogenesis.he highly conserved N-terminal extension of one subunit has been proposed to displace the chaperone G1beta strand from its neighbouring subunit in a mechanism termed donor strand exchange .This entry represents the immunoglobulin (Ig)-like beta-sandwich domain found in PapD.s well as in other periplasmic chaperone proteins that include FimC and SfaE from Escherichia coli.nd Caf1m from Yersinia pestis . In addition.ajor sperm proteins (MSP) and other related sperm proteins (such as WR4 and SSP-19) contain an Ig-like domain with a similar structural fold to PapD . Major sperm proteins are central components in molecular interactions underlying sperm motility.ith many isoforms existing in Caenorhabditis elegans.
  IPR008962:PapD-like
IPR000535:MSP 
Evalue:-13.6777811050415 
Location:1-54
SequencesProtein: Q59EZ6_HUMAN (84 aa)
mRNA: AF086629
Local Annotation
Synapse Ontology
Typical ecretory organelles, some 50 nm in diameter, of presynaptic nerve terminals; accumulate high concentrations of nonpeptide neurotransmitters and secrete these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.
sdb:0094 typical synaptic vesicle  (Evidence:keywords)
Various stages of the synaptic vesicle cycle, including attachment, prefusion, triggering, recycling and reloading of the vesicles with transmitter.
sdb:0098 synaptic vesicle cycling  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 110 residues, 56397650-56397979Exon2: 53 residues, 56426672-56426825Exon3: 36 residues, 56443063-56443167Exon4: 29 residues, 56447406-56447487Exon5: 61 residues, 56449368-56449545Exon6: 945 residues, 56452538-56455367Exon7: 2 residues, -Jump to VAPB_HUMANExon1: 69 residues, 56397774-56397979Exon2: 53 residues, 56426672-56426825Exon3: 493 residues, 56452538-56454012Exon4: 2 residues, -Jump to Q59EZ6_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 3271 56397650-56455367 ~-58K 23407(VAPB)(+)Loci: 3272 56659733-56687986 ~-28K 23415(STX16)(+)Loci: 3273 56701326-56723873 ~-23K 23419(NPEPL1)(+)Loci: 3274 56989705-57003581 ~-14K 23432(TH1L)(+)Loci: 3275 57027703-57035102 ~-7K 23436(TUBB1)(+)Loci: 3270 56318176-56375966 ~-58K 23405(RAB22A)(+)Link out to UCSC