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0PLDN_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NamePLDN
DescriptionPallidin (pallid protein homolog) (syntaxin 13-interacting protein).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0042802 protein self binding (IPI)
0030349 syntaxin-13 binding (TAS)
0016081 synaptic vesicle docking during exocytosis (NAS)

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schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain ArchitectureN/A
SequencesProtein: PLDN_HUMAN (172 aa)
mRNA: NM_012388
Local Annotation
Synapse Ontology
Various stages of the synaptic vesicle cycle, including attachment, prefusion, triggering, recycling and reloading of the vesicles with transmitter.
sdb:0098 synaptic vesicle cycling  (Evidence:keywords)
priming for exocytosis prepares the calcium-dependent release and may involve partial fusion process. The vesicles are primed and become responsive to calcium.
sdb:0120 priming  (Evidence:keywords)
attachment of the vesicle filled with transmitters involves a specific interaction between the vesicle membrane and the presynaptic active zone.
sdb:0148 docking  (Evidence:keywords)
?
sdb:0329 actin in synaptic vesicle cycling  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 103 residues, 43666708-43667015Exon2: 49 residues, 43671624-43671766Exon3: 31 residues, 43682589-43682677Exon4: 31 residues, 43684917-43685004Exon5: 1107 residues, 43685884-43689200Exon6: 2 residues, -Jump to PLDN_HUMAN  
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Loci Cluster (Details)Loci: 4169 43561969-43602294 ~-40K 12281(SLC30A4)(-)Loci: 2887 43666708-43689200 ~-22K 12285(PLDN)(+)Loci: 2888 43714547-43770770 ~-56K 12287(SQRDL)(+)Loci: 4168 43196978-43209349 ~-12K 12269(-)Link out to UCSC