SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0PCQAP_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NamePCQAP
DescriptionPositive cofactor 2 glutamine/q-rich-associated protein (pc2 glutamine/q-rich-associated protein) (tpa-inducible gene 1 protein) (tig-1) (activator-recruited cofactor 105 kda component) (arc105) (ctg repeat protein 7a).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GON/A
Domain ArchitectureN/A
SequencesProtein: PCQAP_HUMAN (788 aa)
mRNA: NM_001003891
Local Annotation
Synapse Ontology
activation of protein kinase C
sdb:0206 activation of protein kinase C  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 50 residues, 19191885-19192033Exon2: 31 residues, 19221403-19221491Exon3: 19 residues, 19235722-19235774Exon4: 12 residues, 19237431-19237461Exon5: 73 residues, 19239222-19239435Exon6: 81 residues, 19248736-19248975Exon7: 119 residues, 19250753-19251104Exon8: 39 residues, 19252807-19252918Exon9: 42 residues, 19259399-19259519Exon10: 47 residues, 19266897-19267034Exon11: 44 residues, 19267126-19267254Exon12: 47 residues, 19267399-19267534Exon13: 23 residues, 19267616-19267680Exon14: 24 residues, 19268645-19268712Exon15: 55 residues, 19269141-19269302Exon16: 57 residues, 19269387-19269554Exon17: 35 residues, 19270014-19270113Exon18: 356 residues, 19270854-19271918Exon19: 2 residues, -Jump to PCQAP_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 3299 19543291-19574108 ~-31K 24234(SNAP29)(+)Loci: 4560 19692503-19698434 ~-6K 24246(-)Loci: 3298 19191885-19271918 ~-80K 24223(PCQAP)(+)Link out to UCSC