SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0NCOA5_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameNCOA5
DescriptionNuclear receptor coactivator 5 (ncoa-5) (coactivator independent of af-2) (cia).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GON/A
Domain Architecture (Details)
InterPro domains unassigned to SynO:
tRNA synthetases.r tRNA ligases are involved in protein synthesis. This domain is found in histidyl.lycyl.hreonyl and prolyl tRNA synthetases it is probably the anticodon binding domain .
  IPR004154:Anticodon-binding
IPR004154:HGTP_anticodon 
Evalue:-1.3979400396347 
Location:199-293
SequencesProtein: NCOA5_HUMAN (579 aa)
mRNA: NM_020967
Local Annotation
Synapse Ontology
Calcium release from RyR (Ryanodine Receptor) in the SR (Sarcoplasmic Reticulum) is activated by the calcium induced-calcium-release
sdb:0325 RyR-CICR  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 634 residues, 44123034-44124935Exon2: 109 residues, 44125405-44125726Exon3: 68 residues, 44127074-44127274Exon4: 44 residues, 44129100-44129227Exon5: 47 residues, 44130547-44130684Exon6: 111 residues, 44132255-44132582Exon7: 24 residues, 44141432-44141499Exon8: 43 residues, 44151862-44151987Exon9: 2 residues, -Jump to NCOA5_HUMANExon1: 631 residues, 44123043-44124935Exon2: 116 residues, 44125382-44125726Exon3: 68 residues, 44127074-44127274Exon4: 44 residues, 44129100-44129227Exon5: 47 residues, 44130547-44130684Exon6: 11 residues, 44132255-44132284Exon7: 53 residues, 44132427-44132582Exon8: 24 residues, 44141432-44141499Exon9: 23 residues, 44151862-44151926Exon10: 2 residues, -Jump to Q6PGQ9_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 4525 44123034-44151987 ~-29K 23235(NCOA5)(-)Loci: 3261 44091244-44122196 ~-31K 23234(SLC12A5)(+)Link out to UCSC