SynDB Home Page
SynDB Home Page

blue bulletSynDB protein details  

Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0JMJ2A_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
DescriptionJumonji domain containing protein 2a.
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
Domain ArchitectureN/A
SequencesProtein: JMJ2A_HUMAN (1064 aa)
mRNA: NM_014663
Local Annotation
Synapse Ontology
Calcium release from RyR (Ryanodine Receptor) in the SR (Sarcoplasmic Reticulum) is activated by the calcium induced-calcium-release
sdb:0325 RyR-CICR  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 29 residues, 43888424-43888510Exon2: 61 residues, 43891394-43891571Exon3: 60 residues, 43893848-43894024Exon4: 40 residues, 43898555-43898670Exon5: 66 residues, 43901151-43901345Exon6: 18 residues, 43903953-43904003Exon7: 36 residues, 43904709-43904813Exon8: 48 residues, 43905211-43905349Exon9: 84 residues, 43906029-43906277Exon10: 68 residues, 43907357-43907557Exon11: 125 residues, 43909762-43910133Exon12: 42 residues, 43921941-43922062Exon13: 62 residues, 43927171-43927353Exon14: 70 residues, 43929102-43929307Exon15: 27 residues, 43929753-43929830Exon16: 20 residues, 43930513-43930569Exon17: 38 residues, 43932251-43932360Exon18: 64 residues, 43932966-43933152Exon19: 59 residues, 43936100-43936271Exon20: 42 residues, 43941874-43941994Exon21: 33 residues, 43942277-43942370Exon22: 414 residues, 43942487-43943725Exon23: 2 residues, -Jump to JMJ2A_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 2511 44217452-44229426 ~-12K 1299(B4GALT2)(+)Loci: 3798 44234742-44255584 ~-21K 1302(SLC6A9)(-)Loci: 2512 44451711-44458938 ~-7K 1306(DMAP1)(+)Loci: 2510 43888424-43943725 ~-55K 1275(JMJD2A)(+)Link out to UCSC