SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0DLC2A_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameDNCL2A
DescriptionDynein light chain 2a, cytoplasmic (dynein-associated protein km23) (bithoraxoid-like protein) (blp).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005737 cytoplasm (ISS)
0005868 cytoplasmic dynein complex (NAS)
0003777 microtubule motor activity (NAS)
0005515 protein binding (NAS)
0007018 microtubule-based movement (NAS)
0008090 retrograde axon cargo transport (ISS)
0007632 visual behavior (ISS)

Warning: fopen(/home/kongl/syndb/www/temp/326367559.dot) [function.fopen]: failed to open stream: Permission denied in /home/kongl/syndb/www/sdb_pro.php on line 269

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 270

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 271

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 272

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 273

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 274

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 299

Warning: fclose(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 300
schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain Architecture (Details)
InterPro domains unassigned to SynO:
This family includes proteins that are about 100 amino acids long. Members of this family of proteins are associated with both flagellar outer arm dynein and Drosophila and rat brain cytoplasmic dynein. We propose that roadblock/LC7 family members may modulate specific dynein functions .
  IPR004942:Roadblock/LC7
IPR004942:Robl_LC7 
Evalue:-30.7695503234863 
Location:2-92
SequencesProtein: DLC2A_HUMAN (95 aa)
mRNA: NM_014183
Local Annotation
Synapse Ontology
The directed movement of substances, either within a vesicle or in the vesicle membrane, into, out of or within a cell.
sdb:0057 axon transport  (Evidence:keywords)
microtubules of the presynaptic compartment function as the tracks for the intense traffic of organelles from cell body to axon terminals and vice versa. It is generally excluded from the presynaptic vesicle cluster.Microtubules do not directly regulate synapse morphology or function
sdb:0087 microtubules  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 22 residues, 32567864-32567927Exon2: 27 residues, 32577733-32577809Exon3: 58 residues, 32586092-32586260Exon4: 127 residues, 32592045-32592422Exon5: 2 residues, -Jump to DLC2A_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 3249 32610179-32611810 ~-2K 22943(MAP1LC3A)(+)Loci: 4518 32766239-32877094 ~-111K 22948(NCOA6)(-)Loci: 3250 32928035-32979424 ~-51K 22955(ACSS2)(+)Loci: 3248 32567864-32592422 ~-25K 22941(DNCL2A)(+)Link out to UCSC