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0COLQ_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameCOLQ
DescriptionAcetylcholinesterase collagenic tail peptide precursor (ache q subunit) (acetylcholinesterase-associated collagen).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005605 basal lamina (TAS)
0005615 extracellular space (TAS)
0001507 acetylcholine catabolism in synaptic cleft (TAS)
0008105 asymmetric protein localization (TAS)

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schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain Architecture (Details)
InterPro domains unassigned to SynO:
Members of this family belong to the collagen superfamily .Collagens are generally extracellular structural proteinsinvolved in formation of connective tissue structure.The sequence is predominantly repeats of the G-X-Y and the polypeptide chainsform a triple helix. The first position of the repeat isglycine.he second and third positions can be any residuebut are frequently proline and hydroxyproline. Collagensare post-translationally modified by proline hydroxylaseto form the hydroxyproline residues. Defectivehydroxylation is the cause of scurvy.Some members of the collagen superfamily are not involvedin connective tissue structure but share the same triplehelical structure.
  IPR008160:Collagen triple helix repeat
Members of this family belong to the collagen superfamily . Collagens are generally extracellular structural proteinsinvolved in formation of connective tissue structure. The sequence is predominantly repeats of the G-X-Y and the polypeptide chainsform a triple helix. The first position of the repeat isglycine.he second and third positions can be any residuebut are frequently proline and hydroxyproline. Collagensare post-translationally modified by proline hydroxylaseto form the hydroxyproline residues. Defectivehydroxylation is the cause of scurvy.Some members of the collagen superfamily are not involvedin connective tissue structure but share the same triplehelical structure.
  IPR008161:Collagen helix repeat
This entry represents a sequence region shared between several proteins of Myxococcus xanthus DK 1622 and some eukaryotic proteins that include human pappalysin-1. The region of about 40 amino acids contains several conserved Cys residues presumed to form disulfide bonds. The region appears in up to 13 repeats in Myxococcus.
  IPR011936:Myxococcus cysteine-rich repeat
IPR008160:Collagen 
Evalue:-11.1191864013672 
Location:210-269IPR008160:Collagen 
Evalue:-11 
Location:96-155IPR008160:Collagen 
Evalue:-9.08618640899658 
Location:156-207IPR011936:myxo_disulf_rpt 
Evalue:0 
Location:372-406
SequencesProtein: COLQ_HUMAN (456 aa)
mRNA: AJ225895 NM_005677
Local Annotation
Synapse Ontology
?
sdb:0328 transmitters release and endocytosis  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 527 residues, 15466644-15468224Exon2: 36 residues, 15470339-15470442Exon3: 42 residues, 15472409-15472530Exon4: 42 residues, 15472970-15473090Exon5: 48 residues, 15474696-15474836Exon6: 34 residues, 15482851-15482948Exon7: 29 residues, 15487046-15487127Exon8: 14 residues, 15490510-15490546Exon9: 17 residues, 15490738-15490783Exon10: 11 residues, 15491435-15491462Exon11: 23 residues, 15491935-15491998Exon12: 26 residues, 15493636-15493708Exon13: 11 residues, 15495487-15495514Exon14: 17 residues, 15495848-15495893Exon15: 36 residues, 15504716-15504818Exon16: 39 residues, 15506035-15506148Exon17: 79 residues, 15538030-15538262Exon18: 2 residues, -Jump to COLQ_HUMANExon1: 148 residues, 15467781-15468224Exon2: 36 residues, 15470339-15470441Exon3: 43 residues, 15472405-15472530Exon4: 42 residues, 15472970-15473090Exon5: 48 residues, 15474696-15474836Exon6: 34 residues, 15482851-15482948Exon7: 29 residues, 15487046-15487127Exon8: 14 residues, 15490510-15490546Exon9: 17 residues, 15490738-15490783Exon10: 11 residues, 15491435-15491462Exon11: 23 residues, 15491935-15491998Exon12: 26 residues, 15493636-15493708Exon13: 11 residues, 15495487-15495514Exon14: 17 residues, 15495848-15495893Exon15: 36 residues, 15504716-15504818Exon16: 39 residues, 15506035-15506148Exon17: 77 residues, 15538030-15538255Exon18: 2 residues, -Jump to COLQ_HUMAN  
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Loci Cluster (Details)Loci: 4589 15271249-15349108 ~-78K 25260(SH3BP5)(-)Loci: 3336 15443865-15459123 ~-15K 25264(EAF1)(+)Loci: 4590 15466644-15538262 ~-72K 25267(COLQ)(-)Loci: 4588 15086583-15115659 ~-29K 25257(ZFYVE20)(-)Link out to UCSC