SynDB Home Page
SynDB Home Page
Browse
Search
Download
Help
People
links

blue bulletSynDB protein details  


Parse error: syntax error, unexpected T_VARIABLE in /home/kongl/syndb/www/sdb_nats.php on line 52
0CHST5_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameCHST5
DescriptionCarbohydrate sulfotransferase 5 (ec 2.8.2.-) (n-acetylglucosamine 6-o- sulfotransferase 3) (glcnac6st-3) (intestinal glcnac-6- sulfotransferase) (intestinal n-acetylglucosamine-6-o- sulfotransferase) (i-glcnac6st) (hign6st) (galactose/n- acetylglucosamine/n-acetylglucosamine 6-o-sulfotransferase 4-alpha) (gst4-alpha).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005794 Golgi apparatus (IDA)
0016021 integral to membrane (NAS)
0031228 intrinsic to Golgi membrane (NAS)
0001517 N-acetylglucosamine 6-O-sulfotransferase ac... (IDA)
0006044 N-acetylglucosamine metabolism (IDA)
0006790 sulfur metabolism (IDA)

Warning: fopen(/home/kongl/syndb/www/temp/1065166731.dot) [function.fopen]: failed to open stream: Permission denied in /home/kongl/syndb/www/sdb_pro.php on line 269

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 270

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 271

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 272

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 273

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 274

Warning: fwrite(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 299

Warning: fclose(): supplied argument is not a valid stream resource in /home/kongl/syndb/www/sdb_pro.php on line 300
schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain Architecture (Details)
InterPro domains unassigned to SynO:
This family includes a range of sulphotransferase proteins including flavonyl 3-sulphotransferase.ryl sulphotransferase.lcohol sulphotransferase.strogen sulphotransferase and phenol-sulphating phenol sulphotransferase. These enzymes are responsible for the transfer of sulphate groups to specific compounds.
  IPR000863:Sulfotransferase
IPR000863:Sulfotransfer_1 
Evalue:-8.35654735565185 
Location:41-358
SequencesProtein: CHST5_HUMAN (390 aa)
mRNA: NM_012126 NM_024533
Local Annotation
Synapse Ontology
Calcium release from RyR (Ryanodine Receptor) in the SR (Sarcoplasmic Reticulum) is activated by the calcium induced-calcium-release
sdb:0325 RyR-CICR  (Evidence:keywords)
KO assignmentK01025
  Level 3 annotation:
    
  Level 2 annotation:
    Cysteine metabolism
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 603 residues, 74119930-74121736Exon2: 23 residues, 74122974-74123039Exon3: 33 residues, 74124487-74124582Exon4: 29 residues, 74134000-74134082Exon5: 27 residues, 74136750-74136827Exon6: 2 residues, -Jump to CHST5_HUMANExon1: 1036 residues, 74119933-74123039Exon2: 33 residues, 74124487-74124582Exon3: 16 residues, 74126525-74126569Exon4: 2 residues, -Jump to CHST5_HUMAN  
Tune and view alternative isoforms
Loci Cluster (Details)Loci: 4236 74119930-74136827 ~-17K 14534(CHST5)(-)Loci: 2952 74157749-74169279 ~-12K 14538(GABARAPL2)(+)Loci: 4237 74219131-74239078 ~-20K 14541(KARS)(-)Loci: 4235 74070013-74073246 ~-3K 14533(CHST6)(-)Link out to UCSC