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0BCAS2_HUMAN*   SwissProt (?) | Description Local Annotation Link Reference
General Information
NameBCAS2
DescriptionBreast carcinoma amplified sequence 2 (dna amplified in mammary carcinoma-1 protein) (spliceosome associated protein spf 27).
SpeciesHomo sapiens (NCBI taxonomy ID: 9606)
GO0005681 spliceosome complex (TAS)
0031202 RNA splicing factor activity, transesterifi... (TAS)
0008380 RNA splicing (TAS)

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schematic display of those terms with internal associations, click the node and browse the corresponding GO term
Domain Architecture (Details)
InterPro domains unassigned to SynO:
This family consists of several eukaryotic sequences of unknown function. The mammalian members of this family are annotated as breast carcinoma amplified sequence 2 (BCAS2) proteins . BCAS2 is a putative spliceosome associated protein .
  IPR008409:Breast carcinoma amplified sequence 2
IPR008409:BCAS2 
Evalue:-148.795883178711 
Location:6-225
SequencesProtein: BCAS2_HUMAN (225 aa)
mRNA: NM_005872
Local Annotation
Synapse Ontology
Calcium release from RyR (Ryanodine Receptor) in the SR (Sarcoplasmic Reticulum) is activated by the calcium induced-calcium-release
sdb:0325 RyR-CICR  (Evidence:keywords)
KO assignmentNot mapped to KEGG
Loci Structure (Details)Loci index, Chromosomal location, Length, Possible relational loci clusterExon1: 232 residues, 114911705-114912400Exon2: 29 residues, 114914135-114914216Exon3: 19 residues, 114914843-114914894Exon4: 56 residues, 114919733-114919895Exon5: 25 residues, 114920831-114920902Exon6: 33 residues, 114925442-114925535Exon7: 50 residues, 114925642-114925788Exon8: 2 residues, -Jump to BCAS2_HUMAN  
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Loci Cluster (Details)Loci: 3822 114435911-114497995 ~-62K 2236(SYT6)(-)Loci: 3823 114911705-114925788 ~-14K 2241(BCAS2)(-)Loci: 3821 114239200-114249215 ~-10K 2227(AP4B1)(-)Link out to UCSC